Species: Medicago truncatula
|
| Gene Symbol |
Primary Locus |
Gene Function |
Gene Location |
#Mutants |
|---|
| API | API | The API gene product is required throughout rhizobial infection of host tissues | located on the upper arm of linkage group 4, between markers MTIC331 and in an interval spanning approximately 2.8 centimorgans | 2 |
| CHR | TC113451 | CHR acts together with CHS to produce 5-deoxyflavonoids | | 1 |
| CHS | TC113573 | CHS is the key enzyme required for the biosynthesis of all flavonoid compounds | | 1 |
| DMI1 | AY497771 | Predicted to be a membrane-spanning protein and may participate in the formation of a receptor-complex for symbiotic signals | Chromosome 2; LG 2; linked to markers 1N1R and DK407-L; close to the telomeric region of the north arm | 5 |
| DMI2 (NORK) | AJ418369 | nodulation receptor kinase, which is predicted to function in the Nod-factor perception/transduction system | Chromosome 5; LG 5; linked to markers PG03 and PJ06; close to the pericentromeric region | 6 |
| DMI3 | AY502066 | Ca2+ and calmodulin-dependent protein kinase | Chromosome 8; LG 8; mapped to the south arm of chromosome, between the two markers SDP1 and PU01 | 9 |
| DNF1 | DNF1 | mutant is defective in nitrogen fixation | | 2 |
| DNF2 | DNF2 | mutant is defective in nitrogen fixation | | 1 |
| DNF3 | DNF3 | mutant is defective in nitrogen fixation | | 1 |
| DNF4 | DNF4 | mutant is defective in nitrogen fixation | | 1 |
| DNF5 | DNF5 | mutant is defective in nitrogen fixation | | 1 |
| DNF6 | DNF6 | mutant is defective in nitrogen fixation | | 1 |
| DNF7 | DNF7 | mutant is defective in nitrogen fixation | | 1 |
| EFD | EFD | ethylene response factor | chromosome 4; near 23H19 marker | 3 |
| ENOD11 | AJ297721 | putative repetitive proline-rich protein | | |
| ENOD12 | X68032 | early nodulin gene | LG 3 | |
| ENOD16 | X99466 | early nodulin ENOD16 | LG 8 | |
| ENOD20 | X99467 | early nodulin gene | | |
| ENOD40-1 | X80262 | M. truncatula enod40 gene for non-translatable RNA | LG 5 | 2 |
| ENOD40-2 | X80264 | M. truncatula enod40 gene for non-translatable RNA | | 2 |
| ENOD8.1 | ENOD8.1 | nodule-specific esterase | | |
| ERN1 (BIT1, PDL) | BIT1 | ERF required for nodulation | between the genetic markers TC87156_1 and TC80512_1 on LG7 | 2 |
| ERN2 | ERN2 | AP2/ERF transcription factor | | |
| ERN3 | ERN3 | AP2/ERF transcription factor | | |
| FNS | TC112893 | FNS converts flavanones to flavones | | 1 |
| GSI | AJ238212 | glutamine synthetase I | | |
| HCL | HCL | control root hair curling | | 3 |
| IFS | TC116337 | IFS converts flavanones to isoflavones | | 1 |
| IPD3 | EF117279 | IPD3 is a nuclear protein which interacts with the symbiotic DMI3 calcium- and calmodulin-dependent protein kinase | mapped to the short arm of chromosome 5 (LG5) between markers MtB93 and MtB108 | 2 |
| LATD | LATD | mutant is lateral root organ defective | top of LG1 (tightly linked to R15J11L) | 1 |
| LIN | LIN | mutant has lumpy infections | chromosome 1; lower arm of LG1; positioned between markers DSI and SCP | 2 |
| LSS | LSS | mutant is hypernodulator; shoot control of phenotype, dominant interaction with sunn | Chromosome 4; LG 4; | |
| LYK1 | LYK1 | LysM domain-containing receptor-like kinase 1 | | |
| LYK2 | LYK2 | LysM domain-containing receptor-like kinase 2 | | |
| LYK3 | LYK3 | LysM domain-containing receptor-like kinase 3 | | 1 |
| LYK4 | LYK4 | LysM domain-containing receptor-like kinase 4 | | 1 |
| LYK5 | LYK5 | LysM domain-containing receptor-like kinase 5 | | |
| LYK6 | LYK6 | LysM domain-containing receptor-like kinase 6 | | |
| LYK7 | LYK7 | LysM domain-containing receptor-like kinase 7 | | |
| MtAnn1 | AJ441322 | annexin | | |
| MtCPK3 | DQ454073 | calcium dependent protein kinase 3 | | 1 |
| MtCRE1 | TC109250 | cytokinin receptor | | 1 |
| MtDVL1 | TC101449 | DVL protein | | 1 |
| MtFNSII-1 | CYP93B10 | Flavone synthase II | | 1 |
| MtFNSII-2 | CYP93B11 | Flavone synthase II | | 1 |
| MtHAP2-1 | MtC10582 | CCAAT-binding transcription factor | | 4 |
| MtHMGR1 | EU302813 | 3-hydroxy-3-methylglutaryl coenzyme A reductase 1 | | 1 |
| MtIRE | AY770392 | Medicago truncatula IRE-like AGC kinase | Chromosome 5, LG 5; The MtIRE gene spans a genomic region of 9.1 kbp and consists of 17 exons and 16 introns | |
| MtMMPL1 (MtN9) | Y18249 | MtMMPL1 early nodulin is a novel member of the matrix metalloendoproteinase family with a role in Medicago truncatula infection by Sinorhizobium meliloti | Chromosome 5, LG 5 | 1 |
| MtN1 | Y10456 | nodulin gene | LG 6 | |
| MtN12 | Y15369 | nodulin gene | | |
| MtN13 | Y10455 | nodulin gene | | |
| MtN3 | AJ307887 | early nodulin gene | | |
| MtN5 | Y15371 | nodulin gene | | |
| MtN6 | Y18225 | nodulin gene | | |
| MtNIN | MtNIN | early nodulin Nodule Inception1 | | 2 |
| MtNOD25 | MtNOD25 | nodulin 25 | MtNOD25 gene is located in a symbiosis island and maps at ≈34 centimorgans on chromosome III | |
| MtPT1 | AF000354 | phosphate transporter | | |
| MtPT2 | AF000355 | phosphate transporter | | |
| MtRALFL1 | TC102073 | rapid alkalinization factor | | 1 |
| MtRBP1 | MtRBP1 | MtRBP1 interacts with the MtENOD40 RNA, and is exported into the cytoplasm during legume nodule development in the region expressing MtENOD40. | | |
| MtRPG | DQ854741 | rhizobium-directed polar growth gene | Chromosome 1 between markers DSI and MTIC370 | 1 |
| MtRR1 | TC95950 | cytokinin signaling response regulator B-type | | |
| MtRR4 | TC103991 | cytokinin signaling response regulator A-type | | |
| MtSINA1 | EU189945 | SINA1 | | 1 |
| MtSINA2 | EU189946 | SINA2 | | 1 |
| MtSINA3 | EU189947 | SINA3 | | 1 |
| MtSINA4 | EU189948 | SINA4 | | 1 |
| MtSINA5 | EU189949 | SINA5 | | 1 |
| MtSINA6 | EU189950 | SINA6 | | 1 |
| MtSYP132 | TC86779 | may function in infection thread development or growth and the early stages of symbiosome formation | | |
| MtSucS1 | AJ131943 | nodule-enhanced sucrose synthase | | 1 |
| Mtsym14 | Mtsym14 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym15 | Mtsym15 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym16 | Mtsym16 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym17 | Mtsym17 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym18 | Mtsym18 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym19 | Mtsym19 | Medicago truncatula symbiotic gene | | 1 |
| Mtsym20 | Mtsym20 | Medicago truncatula symbiotic gene | | 2 |
| Mtsym21 | Mtsym21 | Medicago truncatula symbiotic gene | | 1 |
| NFP | NFP | may be Nod factor receptor or constitute part of a receptor complex | Chromosome 5; LG 5; linked to markers PK12, B07494 and PV02 | 2 |
| NIP | NIP | mutant has numerous infections with polyphenolics | | 3 |
| NSP1 | NSP1 | nodulation signaling pathway | | 2 |
| NSP2 | NSP2 | nodulation signaling pathway | Chromosome 3; LG 3; linked to marker DK201R | 3 |
| PDL (ERN, BIT1) | PDL | mutant has poodle-like root hair clusters | linked to molecular marker 58T | |
| PI-PLC | PI-PLC | PtdIns-specific phospholipase C | | |
| PI3K | PI3K | phosphatidylinositol 3-kinase | | |
| PR-1 | X79778 | pathogenesis-related PR-1 gene | | |
| PRP4 | L23504 | early nodulin (protein-rich protein PRP4) | | |
| RAE | RAE | mutant supresses hypernodulation defect of sunn-1 allele, not root length defect | | |
| RBP1 | AJ508392 | RNA-binding protein RBP1 | | |
| RDN | RDN | mutant is hypernodulator; recessive, root control of phenotype | | |
| RIP1 | U16727 | peroxidase precursor | LG 5 | |
| RIT | RIT | mutant is defective in root hairs, infection threads and trichomes | LG 3 | 1 |
| SKL (MtSkl1) | SKL | regulate the number and distribution of successful infection events | Chromosome 7; LG 7; linked to molecular marker SLR1 | 7 |
| SLI | SLI | mutant has sluggish infections | | |
| STA | STA | The STA locus appears to regulate the plants' sensitivity to ABA with opposite effects depending on the developmental process studied. | | 1 |
| SUNN | SUNN | regulate nodule organogenesis | Chromosome 4; LG 4; linked to molecular markers PCT and NUM1 | 5 |
| SYM1 | SYM1 | Medicago truncatula symbiotic gene | | 1 |
| SYM6 | SYM6 | condition Sinorhizobium strain-specific nitrogen fixation | Chromosome 8; LG 8; linked to markers PI12 and L12200 | 1 |
| SuSy1 | TC100410 | sucrose synthase | | |
| SuSy2 | TC95820 | sucrose synthase | | |
| SuSy3 | TC94447 | sucrose synthase | | |
| Trxs s1 | DQ121444 | thioredoxin s1 | | |
| Trxs s2 | DQ121445 | thioredoxin s2 | | |
Species: Sinorhizobium meliloti |
| Gene Symbol |
Primary Locus |
Gene Function |
Gene Location |
#Mutants |
|---|
| SMa0719 | SMa0719 | short chain alcohol dehydrogenase-related dehydrogenase | pSymA:391032..391751 | 1 |
| SMb20073 | SMb20073 | short chain alcohol dehydrogenase-related dehydrogenase | pSymB:complement(83188..82331) | 1 |
| SMb20076 | SMb20076 | short chain dehydrogenase | pSymB:83965..84981 | 1 |
| SMb20210 | SMb20210 | putative oxidoreductase protein | pSymB:complement(217287..218000) | 1 |
| SMb20214 | SMb20214 | putative oxidoreductase protein | pSymB:222127..222930 | 1 |
| SMb20492 | SMb20492 | putative short chain oxidoreductase protein | pSymB:complement(509567..510469) | 1 |
| SMb20493 | SMb20493 | short chain dehydrogenase | pSymB:complement(510584..511318) | 1 |
| SMb21188 | SMb21188 | putative acyltransferase, possibly surface-saccharide specific acetyltransferase protein | pSymB:938008..939141 | 1 |
| SMb21189 | SMb21189 | putative glycosyltransferase protein | pSymB:939159..940262 | 1 |
| SMb21190 | SMb21190 | putative glycosyltransferase protein | pSymB:940264..941301 | 2 |
| SMc00717 | SMc00717 | PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN | 2863737..2864360 | 1 |
| SMc01113 | SMc01113 | CONSERVED HYPOTHETICAL PROTEIN | 441865..442371 | 1 |
| SMc02486 | SMc02486 | putative oxidoreductase protein | complement(3309557..3310309) | 1 |
| SMc02909 | SMc02909 | PUTATIVE TRANSGLYCOSYLASE TRANSMEMBRANE PROTEIN | 263817..265055 | 1 |
| acpXL | SMc04278 | PROBABLE ACYL CARRIER PROTEIN | complement(2101762..2102049) | 3 |
| actP | SMa1013 | ActP copper transport ATPase | pSymA:560686..563166 | |
| actR | SMc02584 | TRANSCRIPTION REGULATOR PROTEIN | complement(72733..73317) | |
| actS | SMc02585 | SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN | complement(73504..74805) | |
| aniA | SMc03880 | carbon flux regulator, anaerobically induced gene A | 3547948..3548526 | 2 |
| asnO | SMb20481 | putative asparagine synthetase (glutamine amidotransferase) protein | pSymB:494919..496694 | 1 |
| bacA | SMb20999 | putative transport protein, essential for bacteroid development protein | pSymB:complement(1235141..1236403) | 25 |
| bioS | SMc02061 | BIOTIN-REGULATED PROTEIN | 1656033..1656686 | 4 |
| bluB | SMc00166 | PUTATIVE OXIDOREDUCTASE NAD PROTEIN | complement(1998826..1999509) | 4 |
| catC (katC) | SMb20007 | probable catalase C protein | pSymB:10154..12271 | 3 |
| cbrA | SMc00776 | PUTATIVE SENSOR HISTIDINE KINASE PROTEIN | complement(793692..797096) | 1 |
| ccmC | SMc03849 | PUTATIVE HEME EXPORTER C (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE | 3515202..3515972 | 1 |
| chvG (exoS) | SMc04446 | HISTIDINE KINASE SENSORY TRANSMEMBRANE PROTEIN | complement(49252..51039) | 11 |
| chvI | SMc02560 | TRANSCRIPTIONAL REGULATORY PROTEIN | complement(51419..52141) | 6 |
| clpX | SMc01904 | ATP-dependent protease ATP-binding subunit | 1363000..1364277 | |
| cpdR1 | SMc04044 | | 3047905..3048267 | 1 |
| cpdR2 | SMc00720 | putative 2-component receiver domain protein | 2861678..2862037 | 1 |
| cycH | SMc02361 | CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN | 1107820..1108965 | 1 |
| cycJ | SMc02362 | CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN | 1108962..1109414 | |
| cycK | SMc02363 | CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN | 1109411..1111441 | 1 |
| cycL | SMc02364 | CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN | 1111502..1111957 | |
| cysG | SMc01053 | PROBABLE SIROHEME SYNTHASE PROTEIN | 1583260..1584717 | 1 |
| dctA | SMb20611 | C4-dicarboxylate transport protein | pSymB:complement(1626577..1627902) | 10 |
| dctB | SMb20612 | C4-dicarboxylate transport sensor protein | pSymB:1628134..1629999 | 25 |
| dctD | SMb20613 | C4-dicarboxylate transport transcriptional regulatory protein | pSymB:1630003..1631385 | 16 |
| dctM | SMb21351 | putative C4-dicarboxylate large membrane transport protein | pSymB:complement(1016547..1017830) | |
| dctP | SMb21353 | putative periplasmic C4-dicarboxylate transport protein | pSymB:complement(1018487..1019464) | |
| dctQ | SMb21352 | putative C4-dicarboxylate small membrane transport protein | pSymB:complement(1017835..1018332) | |
| ddhB | SMb21417 | putative CDP-glucose 4,6-dehydratase protein | pSymB:1346712..1347782 | 2 |
| degP1 | SMc02365 | PROTEASE PRECURSOR PROTEIN | 1112257..1113771 | 4 |
| dme | SMc00169 | NAD-MALIC ENZYME OXIDOREDUCTASE PROTEIN | 1993451..1995763 | 6 |
| emmA | SMb21521 | Three-component system protein, involved in exopolysaccharide production, motility and membrane stress response | pSymB:complement(1445257..1445715) | 2 |
| emmB | SMb21519 | Three-component system protein, involved in exopolysaccharide production, motility and membrane stress response | pSymB:1443139..1444611 | 1 |
| emmC | SMb21520 | Three-component system protein, involved in exopolysaccharide production, motility and membrane stress response | pSymB:1444608..1445267 | 2 |
| exoA | SMb20957 | glucosyltransferase protein | pSymB:1184469..1185461 | 22 |
| exoB | SMb20942 | UDP glucose 4-epimerase protein | pSymB:1168150..1169136 | 30 |
| exoD | SMc00353 | PUTATIVE TRANSMEMBRANE PROTEIN | complement(308106..308828) | 10 |
| exoF1 | SMb20945 | hypothetical outer membrane protein, similar to Wza, OMA family | pSymB:complement(1171541..1172806) | 19 |
| exoF2 | SMb21073 | putative OMA family outer membrane saccharide export protein, similar to ExoF | pSymB:complement(709463..710830) | |
| exoF3 | SMb21245 | putative OMA family outer membrane protein precursor, similar to ExoF | pSymB:813621..814871 | |
| exoH | SMb20954 | succinyltransferase protein | pSymB:1181238..1182350 | 12 |
| exoI | SMb20951 | putative periplasmatic protein | pSymB:1179773..1180348 | 2 |
| exoI2 | SMb21662 | putative periplasmic protein | pSymB:complement(669334..669843) | |
| exoK | SMb20955 | endo-beta-1,3-1,4-glycanase protein | pSymB:1182356..1183165 | 6 |
| exoL | SMb20956 | putative glucosyltransferase protein | pSymB:1183261..1184472 | 2 |
| exoM | SMb20958 | glucosyltransferase protein | pSymB:1185461..1186390 | 16 |
| exoN | SMb20960 | UDPglucose pyrophosphorylase protein | pSymB:1187438..1188343 | 5 |
| exoN2 | SMc04023 | PROBABLE UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE PROTEIN | complement(3021043..3021930) | |
| exoO | SMb20959 | glucosyltransferase protein | pSymB:1186387..1187433 | 1 |
| exoP | SMb20961 | protein tyrosine kinase, MPA1 family, involved in succinoglycan chain-length determination | pSymB:1188398..1190758 | 14 |
| exoP2 | SMb21070 | putative MPA1 family auxiliary surface saccharide export protein, similar to chain-length determination proteins | pSymB:705774..707672 | |
| exoQ | SMb20944 | putative polysaccharide polymerase, similar to Wzy protein | pSymB:complement(1170226..1171533) | 3 |
| exoR | SMc02078 | EXOPOLYSACCHARIDE BIOSYNTHESIS REGULATORY PROTEIN | 1637310..1638116 | 14 |
| exoT | SMb20950 | putative transport protein, similar to Wzx | pSymB:1177910..1179394 | 2 |
| exoU | SMb20948 | glucosyltransferase protein | pSymB:1174743..1175771 | 3 |
| exoV | SMb20949 | putative pyruvyltransferase protein | pSymB:complement(1175762..1176712) | 6 |
| exoW | SMb21690 | glucosyltransferase protein | pSymB:complement(1176826..1177785) | 2 |
| exoX | SMb20947 | posttranscriptional regulator, repressor protein | pSymB:1174312..1174608 | 9 |
| exoY | SMb20946 | galactosyltransferase protein | pSymB:complement(1172859..1173539) | 20 |
| exoZ | SMb20943 | acetyltransferase protein | pSymB:complement(1169222..1170175) | 2 |
| expA1 (wgaA) | SMb21319 | putative membrane-anchored protein | pSymB:986060..987532 | 5 |
| expA10 (wgaJ) | SMb21327 | putative dTDP-4-dehydrorhamnose reductase protein | pSymB:996326..997228 | 1 |
| expA23 (wgaB) | SMb21320 | putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein | pSymB:987519..990200 | 8 |
| expA4 (wgaD) | SMb21321 | putative membrane-anchored protein | pSymB:990235..991413 | |
| expA5 (wgaE) | SMb21322 | putative membrane-anchored protein | pSymB:991456..992628 | 1 |
| expA6 (wgaF) | SMb21323 | putative protein, probably exported to periplasma | pSymB:992615..993787 | |
| expA7 (wgaG) | SMb21324 | putative glucose-1-phosphate thymidyltransferase protein | pSymB:993810..994691 | |
| expA8 (wgaH) | SMb21325 | putative dTDP-4-dehydrorhamnose 3,5-epimerase protein | pSymB:994684..995247 | 1 |
| expA9 (wgaI) | SMb21326 | putative dTDP-D-glucose 4,6-dehydratase protein | pSymB:995259..996329 | |
| expC (wgcC) | SMb21318 | putative glycosyltransferase, forming alpha-glycosyl linkages protein | pSymB:984623..985876 | 6 |
| expD1(wgdA) | SMb21316 | putative ABC transporter protein, fused ATP-binding and membrane-spanning components, secretes ExpE1 | pSymB:complement(981935..983704) | 7 |
| expD2 (wgdB) | SMb21315 | putative protein secretion protein, HlyD family membrane fusion protein, secretes ExpE1 | pSymB:complement(980517..981938) | 4 |
| expE1 (wgeA) | SMb21314 | putative secreted calcium-binding protein | pSymB:complement(979583..980242) | 4 |
| expE2 (wgeB) | SMb21313 | putative bifunctional glycosyltransferase, forming alpha-glycosyl and beta-glycosyl linkages protein | pSymB:complement(977203..979452) | 5 |
| expE3 (wgeC) | SMb21312 | putative methyltransferase protein | pSymB:complement(976361..977206) | 1 |
| expE4 (wgeD) | SMb21311 | putative glycosyltransferase, forming alpha-gylcosyl linkages protein | pSymB:complement(975102..976364) | |
| expE5 (wgeE) | SMb21310 | putative membrane-anchored protein | pSymB:complement(974386..975090) | |
| expE6 (wgeF) | SMb21309 | putative membrane protein | pSymB:complement(972161..974377) | |
| expE7 (wgeG) | SMb21308 | putative glycosyltransferase, forming alpha glycosyl linkages protein | pSymB:complement(970842..972164) | 1 |
| expE8 (wgeH) | SMb21307 | putative protein | pSymB:complement(969820..970797) | 1 |
| expG (mucS, wggR) | SMb21317 | transcriptional activator of exopolysaccharide II synthesis, MarR family protein | pSymB:983901..984485 | 5 |
| expR | SMc03896 | quorum sensing, LuxR homolog, activation of galactoglucan synthesis | complement(3566370..3568434) | 6 |
| fabG | SMc00572 | PROBABLE 3-OXOACYL-ACYL-CARRIER PROTEIN REDUCTASE | 1241639..1242376 | 1 |
| fabI1 | SMc00005 | enoyl-(acyl carrier protein) reductase | 986489..987307 | 1 |
| fabI2 | SMc00326 | enoyl-(acyl carrier protein) reductase | 281600 .. 280794 | 1 |
| fadD | SMc02162 | PROBABLE LONG-CHAIN-FATTY-ACID--COA LIGASE PROTEIN | complement(532686..534386) | |
| fdxN | SMa0811 | FdxN ferredoxin | pSymA:complement(443981..444175) | 7 |
| feuP | SMc00458 | PROBABLE TRANSCRIPTION REGULATOR PROTEIN | 1104977..1105648 | 2 |
| feuQ | SMc00129 | PROBABLE SENSOR HISTIDINE KINASE PROTEIN | 1105638..1107023 | 1 |
| fixA | SMa0822 | FixA electron transfer flavoprotein beta chain | pSymA:complement(450461..451339) | 3 |
| fixB | SMa0819 | FixB electron transfer flavoprotein alpha chain | pSymA:complement(449368..450429) | 2 |
| fixC | SMa0817 | FixC oxidoreductase | pSymA:complement(448049..449356) | 1 |
| fixG | SMa1211 | FixG Iron sulfur membrane protein | pSymA:complement(665557..667131) | 9 |
| fixH | SMa1210 | FixH nitrogen fixation protein | pSymA:complement(665057..665560) | 5 |
| fixI1 | SMa1209 | FixI1 copper transport ATPase | pSymA:complement(662787..665060) | 15 |
| fixI2 | SMa0621 | FixI2 E1-E2 type cation ATPase | pSymA:331477..333744 | |
| fixJ | SMa1227 | FixJ Transcriptional activator | pSymA:complement(672774..673388) | 9 |
| fixK1 | SMa1225 | FixK1 Transcriptional activator | pSymA:complement(671613..672248) | 3 |
| fixK2 | SMa0762 | FixK2 transcription regulator | pSymA:412790..413425 | 1 |
| fixL | SMa1229 | FixL Oxygen regulated histidine kinase | pSymA:complement(673381..674898) | 11 |
| fixN1 | SMa1220 | FixN1 Heme b / copper cytochrome c oxidase subunit | pSymA:complement(669143..670762) | |
| fixN2 | SMa0765 | FixN2 cytochrome c oxidase polypeptide I | pSymA:414187..415806 | |
| fixN3 | SMa0612 | FixN3 cytochrome c oxidase subunit 1 | pSymA:326972..328627 | |
| fixO1 | SMa1216 | FixO1 c-type cytochrome | pSymA:complement(668398..669129) | |
| fixO2 | SMa0766 | FixO2 cytochrome c oxidase | pSymA:415818..416549 | |
| fixO3 | SMa0615 | FixO3 cytochrome-c oxidase subunit | pSymA:328632..329384 | |
| fixP1 | SMa1213 | FixP1 Di-heme cytochrome c | pSymA:complement(667360..668229) | |
| fixP2 | SMa0769 | FixP2 cytochrome c oxidase | pSymA:416717..417580 | |
| fixP3 | SMa0617 | FixP3 cytochrome c oxidase membrane anchored subunit | pSymA:329568..330449 | |
| fixQ1 | SMa1214 | FixQ1 cbb3-type cytochrome oxidase | pSymA:complement(668233..668385) | |
| fixQ2 | SMa0767 | FixQ2 cbb3-type cytochrome oxidase | pSymA:416561..416713 | |
| fixQ3 | SMa0616 | FixQ3 nitrogen fixation protein | pSymA:329407..329577 | |
| fixS1 | SMa1208 | FixS1 nitrogen fixation protein | pSymA:complement(662623..662790) | |
| fixS2 | SMa0622 | FixS2 nitrogen fixation protein | pSymA:333741..334001 | |
| fixT1 | SMa1226 | FixT1 Inhibitor of FixL autophosphorylation | pSymA:complement(672328..672675) | 2 |
| fixT2 | SMa0760 | FixT2 transcription regulator | pSymA:412363..412710 | 2 |
| fixT3 | SMc03254 | PUTATIVE ANTIKINASE PROTEIN | complement(3369116..3369445) | |
| fixU | SMa0810 | FixU nitrogen fixation protein | pSymA:complement(443587..443793) | |
| fixX | SMa0816 | FixX ferredoxin-like protein | pSymA:complement(447740..448036) | |
| flgH | SMc03034 | FLAGELLAR L-RING PROTEIN PRECURSOR (BASAL BODY L-RING PROTEIN) | 729052..729762 | 1 |
| fliP | SMc03036 | FLAGELLAR BIOSYNTHETIC TRANSMEMBRANE PROTEIN | 730277..731014 | 1 |
| glgA1 | SMc03924 | PROBABLE GLYCOGEN SYNTHASE (STARCH [BACTERIAL GLYCOGEN] SYNTHASE) PROTEIN | 3071302..3072744 | 5 |
| glgA2 | SMb20704 | putative glycogen synthase protein | pSymB:1505461..1506921 | 4 |
| glnB | SMc00947 | NITROGEN REGULATORY PROTEIN PII | 1774339..1774677 | 2 |
| glnD | SMc01124 | PII uridylyl-transferase | 429607..432456 | 3 |
| gltA | SMc02087 | CITRATE SYNTHASE PROTEIN | complement(1622121..1623410) | |
| greA | SMc01218 | PROBABLE TRANSCRIPTION ELONGATION FACTOR (TRANSCRIPT CLEAVAGE FACTOR) PROTEIN | complement(1706186..1706662) | 1 |
| groEL1 | SMc00913 | 60 KD CHAPERONIN A PROTEIN | complement(869135..870772) | 3 |
| groEL2 | SMa0744 | groEL2 chaperonin | pSymA:complement(399043..400680) | |
| groEL3 | SMa0124 | GroEL3 chaperonin | pSymA:complement(66192..67826) | 1 |
| groEL4 | SMc01758 | 60 KD CHAPERONIN B (GROEL) PROTEIN | complement(1303835..1305463) | 1 |
| groES1 | SMc00912 | 10 KD CHAPERONIN A PROTEIN | complement(870848..871144) | |
| groES2 | SMa0745 | groES2 chaperonin | pSymA:complement(400756..401052) | |
| groES3 | SMa0125 | GroES3 chaperonin | pSymA:complement(67874..68191) | 1 |
| gtrA | SMa0160 | putative GntR-family transcription regulator | pSymA:88416..89090 | 1 |
| gtrB | SMa0222 | putative GntR-family transcription regulator | pSymA:122050..122778 | 1 |
| hemA | SMc03104 | PROBABLE 5-AMINOLEVULINIC ACID SYNTHASE (DELTA-AMINOLEVULINATE SYNTHASE) (DELTA-ALA SYNTHETASE) PROTEIN | complement(3237290..3238507) | 3 |
| hmrR | SMa1014 | HmrR heavy metal dependent transcriptional regulator | pSymA:563252..563668 | |
| hprK | SMc02752 | HPrK kinase/phosphatase | complement(48809..49255) | 1 |
| idhA | SMb20899 | hypothetical myo-inositol dehydrogenase protein | pSymB:1306775..1307767 | 4 |
| ilvC | SMc04346 | KETOL-ACID REDUCTOISOMERASE PROTEIN | complement(2230742..2231761) | 3 |
| ilvD2 | SMc04045 | PROBABLE DIHYDROXY-ACID DEHYDRATASE PROTEIN | 3049059..3050897 | 3 |
| ilvI | SMc01431 | PROBABLE ACETOLACTATE SYNTHASE ISOZYME III LARGE SUBUNIT PROTEIN | complement(2274751..2276529) | 3 |
| katA | SMc00819 | CATALASE HYDROPEROXIDASE HPII(III) PROTEIN | 840311..841795 | 3 |
| katB | SMa2379 | catalase/peroxidase | pSymA:complement(1342282..1344465) | 2 |
| leuA1 | SMc02717 | 2-ISOPROPYLMALATE SYNTHASE PROTEIN | complement(2564972..2566681) | 2 |
| leuB | SMc04405 | PROBABLE 3-ISOPROPYLMALATE DEHYDROGENASE PROTEIN | 3611782..3612894 | 2 |
| leuC | SMc03823 | PROBABLE 3-ISOPROPYLMALATE DEHYDRATASE LARGE SUBUNIT PROTEIN | complement(3488934..3490343) | 1 |
| leuD | SMc03795 | PROBABLE 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT PROTEIN | 3460581..3461186 | 1 |
| lon | SMc01905 | PROBABLE ATP-DEPENDENT PROTEASE LA PROTEIN | 1364751..1367171 | 1 |
| lpsB | SMc01219 | PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS MANNOSYLTRANSFERASE PROTEIN | complement(1705047..1706102) | 14 |
| lpsC | SMc01222 | PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN | 1702159..1702971 | 4 |
| lpsD | SMc01221 | PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN | 1702990..1704021 | 1 |
| lpsE | SMc01220 | PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN | 1704018..1705040 | 3 |
| lpsL | SMc02640 | UDP-GLUCURONIC ACID EPIMERASE PROTEIN | complement(1181090..1182115) | 3 |
| lpsS | SMc04267 | LPS sulfotransferase | complement(2198528..2199298) | 3 |
| lpxXL | SMc04268 | lipid A biosynthesis lauroyl acyltransferase | complement(2096413..2097351) | 2 |
| lrp | SMc00681 | PROBABLE LEUCINE-RESPONSIVE REGULATORY PROTEIN | 2894680..2895144 | |
| lsrA | SMc00037 | putative transcription regulator protein | 1051802..1052710 | 1 |
| lsrB | SMc01225 | putative transcription regulator protein | complement(1699144..1700052) | 1 |
| mdh | SMc02479 | PROBABLE MALATE DEHYDROGENASE PROTEIN | complement(3318498..3319460) | 1 |
| metA | SMc03797 | PROBABLE HOMOSERINE O-SUCCINYLTRANSFERASE PROTEIN | 3461839..3462834 | 1 |
| minC | SMb21524 | putative cell division inhibitor protein | pSymB:complement(1447281..1448030) | 1 |
| minD | SMb21523 | putative cell division inhibitor protein | pSymB:complement(1446368..1447183) | 2 |
| minE | SMb21522 | putative cell division inhibitor protein | pSymB:complement(1446108..1446371) | 3 |
| msbA2 | SMb21191 | putative surface saccharide exporting ABC transporter protein, consisting of ATP-binding and membrane-spanning domains | pSymB:941311..943104 | 7 |
| mucR | SMc00058 | TRANSCRIPTION REGULATOR PROTEIN | 1091371..1091802 | 10 |
| ndvA | SMc03900 | BETA-1-->2GLUCAN EXPORT ATP-BINDING PROTEIN | 3568721..3570571 | 1 |
| ndvB | SMc04382 | BETA-(1,2)-GLUCAN PRODUCTION ASSOCIATED TRANSMEMBRANE PROTEIN | complement(3573301..3581799) | 20 |
| nesR | SMc04032 | LuxR-type response regulator | complement(3035290..3036072) | 1 |
| nex18 | SMa1077 | Nex18 Symbiotically induced conserved protein | pSymA:588601..589083 | 1 |
| nfeD | SMb20990 | probable membrane protein necessary for nodulation competitiveness | pSymB:complement(1223683..1225119) | |
| nifA | SMa0815 | NifA transcriptional activator
| pSymA:complement(445895..447466) | 6 |
| nifB | SMa0814 | NifB FeMo cofactor biosynthesis protein | pSymA:complement(444206..445678) | 4 |
| nifD | SMa0827 | NifD nitrogenase Fe-Mo alpha chain | pSymA:454549..456051 | 5 |
| nifE | SMa0830 | NifE oxidoreductase | pSymA:457737..459167 | |
| nifH | SMa0825 | NifH nitrogenase Fe protein | pSymA:453556..454449 | 7 |
| nifK | SMa0829 | NifK nitrogenase Fe-Mo beta chain | pSymA:456142..457683 | 2 |
| nifN | SMa0873 | NifN Nitrogenase Fe-Mo cofactor biosynthesis protein | pSymA:483756..485081 | 6 |
| nifS | SMc00529 | PUTATIVE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE PROTEIN | complement(1880026..1881192) | |
| nifX | SMa0831 | NifX nitrogen fixation protein | pSymA:459663..460163 | |
| nodA | SMa0869 | NodA N-acyltransferase | pSymA:complement(480954..481544)
| 11 |
| nodB | SMa0868 | NodB chitooligosaccharide deacetylase | pSymA:complement(480304..480957) | 11 |
| nodC | SMa0866 | NodC N-acetylglucosaminyltransferase | pSymA:complement(479009..480289)
| 7 |
| nodD1 | SMa0870 | NodD1 transcription regulator | pSymA: 481810..482736 | 13 |
| nodD2 | SMa0757 | NodD2 nod box-dependent transcription activator | pSymA: 409254..410186 | 11 |
| nodD3 | SMa0840 | NodD3 transcriptional regulator | pSymA:complement(462751..463692)
| 18 |
| nodE | SMa0853 | NodE beta ketoacyl ACP synthase | pSymA:469913..471121
| 18 |
| nodF | SMa0852 | NodF acyl carrier protein | pSymA:469631..469912 | 12 |
| nodG | SMa0854 | NodG 3-oxoacyl-(acyl carrier protein) reductase | pSymA:471615..472352 | 2 |
| nodH | SMa0851 | NodH sulfotransferase | pSymA:complement(468199..468942) | 10 |
| nodI | SMa0864 | NodI membrane transport protein | pSymA:complement(477934..479001)
| 3 |
| nodJ | SMa0863 | NodJ membrane transport protein | pSymA:complement(477142..477930) | 3 |
| nodL | SMa0772 | NodL Nod factor acetyltransferase | pSymA:418345..418896 | 5 |
| nodM | SMa0878 | NodM Glutamine aminotransferase | pSymA:complement(490023..491849) | 2 |
| nodN | SMa0874 | NodN putative dehydratase | pSymA:complement(485169..485654) | 2 |
| nodN2 | SMc03927 | PUTATIVE NODULATION PROTEIN | 3076748..3077236 | |
| nodP1 | SMa0855 | NodP1 ATP-SULFURYLASE SMALL SUBUNIT | pSymA:472764..473663 | 2 |
| nodP2 | SMb21223 | putative sulfate adenylyltransferase subunit 2 protein | pSymB:786637..787536 | |
| nodQ1 | SMa0857 | NodQ1 ATP-SULFURYLASE LARGE SUBUNIT)-APS KINASE | pSymA:473663..475588 | 8 |
| nodQ2 | SMb21224 | putative sulfate adenylyltransferase subunit 1 adenylsulfate kinase protein | pSymB:787536..789437 | 2 |
| noeA | SMa0773 | NoeA host specific nodulation protein | pSymA:419284..420714 | 1 |
| noeB | SMa0774 | NoeB host specific nodulation protein | pSymA:420721..422382 | 1 |
| nolF | SMa0876 | NolF secretion protein | pSymA:complement(488862..489965) | 2 |
| nolG | SMa0875 | NolG efflux transporter | pSymA:complement(485661..488858) | 2 |
| nolR | SMc02330 | Nodulation protein nolR | 2595019..2595385 | 2 |
| ntrB | SMc01042 | NITROGEN REGULATION PROTEIN | 1568272..1569420 | |
| ntrC | SMc01043 | NITROGEN ASSIMILATION REGULATORY PROTEIN | 1569417..1570871 | 18 |
| ntrP | SMc03949 | NITROGEN REGULATORY PROTEIN | 2611440..2611712 | 2 |
| ntrR1 | SMc01521 | NITROGEN REGULATORY PROTEIN | 2611709..2612113 | 2 |
| ntrX | SMc01045 | PROBABLE NITROGEN REGULATION PROTEIN | 1573356..1574720 | |
| ntrY | SMc01044 | PROBABLE NITROGEN REGULATION TRANSMEMBRANE PROTEIN | 1571105..1573366 | |
| olsA | SMc01116 | putative acyltransferase transmembrane protein | 438442..439320 | 3 |
| olsB | SMc01127 | CONSERVED HYPOTHETICAL PROTEIN | 423198..424088 | 2 |
| pckA | SMc02562 | PHOSPHOENOLPYRUVATE CARBOXYKINASE PROTEIN | 52483..54093 | 3 |
| pcm | SMc02062 | L-ISOASPARTYL PROTEIN CARBOXYL METHYLTRANSFERASE | 1655247..1655861 | 1 |
| pdh | SMb20020 | putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein | pSymB:complement(27345..29423) | |
| pdhAa | SMc01030 | PYRUVATE DEHYDROGENASE ALPHA2 SUBUNIT PROTEIN | 1555947..1556993 | |
| pdhAb | SMc01031 | PYRUVATE DEHYDROGENASE BETA2 SUBUNIT PROTEIN | 1557011..1558393 | |
| pdhB | SMc01032 | DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE PROTEIN | 1558406..1559749 | |
| pgm | SMc03925 | PROBABLE PHOSPHOGLUCOMUTASE (GLUCOSE PHOSPHOMUTASE) PROTEIN | 3072749..3074377 | 1 |
| phaA1 | SMc03179 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM TRANSMEMBRANE PROTEIN | 3143729..3146728 | |
| phaA2 | SMc00051 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1085034..1087409 | |
| phaB2 | SMc00052 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1087406..1087825 | |
| phaC1 | SMc03180 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM C TRANSMEMBRANE PROTEIN | 3146728..3147075 | |
| phaC2 | SMc00053 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1087825..1088202 | |
| phaD1 | SMc03181 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM D TRANSMEMBRANE PROTEIN | 3147068..3148687 | |
| phaD2 | SMc00054 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1088209..1089774 | |
| phaE1 | SMc03182 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM E TRANSMEMBRANE PROTEIN | 3148690..3149175 | |
| phaE2 | SMc00055 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1089771..1090247 | |
| phaF1 | SMc03183 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM F TRANSMEMBRANE PROTEIN | 3149172..3149453 | |
| phaF2 | SMc00056 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1090244..1090615 | 2 |
| phaG1 | SMc03184 | PH ADAPTATION POTASSIUM EFFLUX SYSTEM G TRANSMEMBRANE PROTEIN | 3149450..3149815 | |
| phaG2 | SMc00057 | PUTATIVE CATION EFFLUX SYSTEM PROTEIN | 1090615..1090965 | 2 |
| phbA | SMc03879 | ACETYL-COA ACETYLTRANSFERASE PROTEIN | complement(3546544..3547725) | |
| phbB | SMc03878 | ACETOACETYL-COA REDUCTASE PROTEIN | complement(3545701..3546426) | 1 |
| phbC | SMc00296 | POLY3-HYDROXYBUTYRATE POLYMERASE PROTEIN | 1868133..1869968 | 6 |
| phoB | SMc02140 | PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN | 572383..573066 | 6 |
| phoC | SMb21177 | phosphate uptake ABC transporter ATP-binding protein | pSymB:complement(923271..924110) | 9 |
| phoD | SMb21176 | phosphate uptake ABC transporter periplasmic solute-binding protein precursor | pSymB:complement(922274..923179) | 1 |
| phoE | SMb21175 | phosphate uptake ABC transporter permease protein | pSymB:complement(921140..922102) | 1 |
| phoR | SMc02147 | PROBABLE PHOSPHATE REGULON SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN | 565258..566520 | |
| phoT | SMb21174 | phosphate uptake ABC transporter permease protein | pSymB:complement(919613..921130) | 2 |
| phoU | SMc02141 | PROBABLE PHOSPHATE TRANSPORT SYSTEM TRANSCRIPTIONAL REGULATOR PROTEIN | 571559..572272 | 4 |
| pit | SMc02861 | PHOSPHATE TRANSPORT TRANSMEMBRANE PROTEIN | complement(214914..215918) | 3 |
| ppiB | SMc01208 | PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PROTEIN | 1720429..1720938 | 1 |
| psd | SMc00551 | phosphatidylserine decarboxylase | 1220729..1221427 | 1 |
| pstC | SMc02144 | PROBABLE PHOSPHATE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN | 568413..569324 | 3 |
| pth | SMc02693 | PROBABLE PEPTIDYL-TRNA HYDROLASE PROTEIN | 2543265..2543984 | 1 |
| purL | SMc00488 | PROBABLE PHOSPHORIBOSYLFORMYL GLYCINAMIDINE SYNTHETASE II PROTEIN | 1921045..1923276 | 1 |
| putA | SMc02181 | BIFUNCTIONAL: PROLINE DEHYDROGENASE AND DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE PROTEIN | complement(511820..515521) | 1 |
| pyc | SMc03895 | PROBABLE PYRUVATE CARBOXYLASE PROTEIN | | 2 |
| pyrE | SMc02165 | PROBABLE OROTATE PHOSPHORIBOSYLTRANSFERASE PROTEIN | 528931..529629 | 1 |
| queA | SMc01207 | PROBABLE S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE | 1721115..1722197 | 1 |
| relA | SMc02659 | PUTATIVE GTP PYROPHOSPHOKINASE (ATP:GTP 3'-PYROPHOSPHOTRANSFERASE) PROTEIN | 1164419..1166644 | 6 |
| rkpA | SMc02273 | FATTY ACID SYNTHASE TRANSMEMBRANE PROTEIN | complement(640572..648086) | |
| rkpG | SMc02272 | ACYL-TRANSFERASE TRANSFERASE PROTEIN | complement(639160..640575) | |
| rkpH | SMc02271 | RIBITOL TYPE DEHYDROGENASE PROTEIN | complement(638317..639120) | |
| rkpI | SMc02270 | CAPSULAR POLYSACCHARIDE BIOSYNTHESIS\EXPORT TRANSMEMBRANE PROTEIN | complement(636619..638235) | |
| rkpJ | SMc02269 | CAPSULAR POLYSACCHARIDE BIOSYNTHESIS/EXPORT PROTEIN | complement(635270..636595) | |
| rkpK | SMc02641 | UDP-GLUCOSE 6-DEHYDROGENASE PROTEIN | complement(1179630..1180943) | 1 |
| rkpU | SMc02274 | CAPSULE POLYSACCHARIDE EXPORTER PROTEIN | 648544..649677 | |
| rkpZ1 | SMb20834 | probable surface saccharide synthesis protein, possibly involved in chain-length determination | pSymB:complement(625738..627036) | 1 |
| rkpZ2 | SMb20823 | putative cell surface saccharide synthesis protein, possibly involved in chain-length determination, truncated N-terminus | pSymB:complement(611880..612911) | 1 |
| ropB1 | SMc00604 | PROBABLE OUTER MEMBRANE PROTEIN | 1275457..1276095 | 1 |
| rpoB | SMc01317 | PROBABLE DNA-DIRECTED RNA POLYMERASE BETA CHAIN PROTEIN | 1464312..1468454 | 2 |
| rpoC | SMc01316 | PROBABLE DNA-DIRECTED RNA POLYMERASE BETA' CHAIN PROTEIN | 1468640..1472845 | 2 |
| rpoH1 | SMc00646 | PROBABLE RNA POLYMERASE SIGMA-32 FACTOR HEAT SHOCK REGULATORY PROTEIN | 2929335..2930240 | 6 |
| rpoH2 | SMc03873 | PUTATIVE RNA POLYMERASE SIGMA FACTOR PROTEIN | complement(3538506..3539345) | 5 |
| rpoN (ntrA) | SMc01139 | RNA POLYMERASE SIGMA-54 FACTOR PROTEIN | complement(411264..412808) | 10 |
| sinI | SMc00168 | PUTATIVE AUTOINDUCER SYNTHASE PROTEIN | 1996863..1997507 | 2 |
| sitA | SMc02509 | PUTATIVE IRON-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN | 3283929..3284834 | 2 |
| sitB | SMc02508 | PUTATIVE IRON TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN | 3284831..3285766 | |
| sitC | SMc02507 | PUTATIVE IRON TRANSPORT SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN | 3285763..3286620 | |
| sitD | SMc02506 | PUTATIVE IRON TRANSPORT SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN | 3286617..3287471 | |
| sodB | SMc00043 | PROBABLE SUPEROXIDE DISMUTASE FE PROTEIN | 1067033..1067635 | 2 |
| sodC | SMc02597 | PUTATIVE SUPEROXIDE DISMUTASE CU-ZN PRECURSOR (BACTERIOCUPREIN) TRANSMEMBRANE PROTEIN | 1197390..1197908 | |
| stcD2 | SMb21570 | putative NADH-dependent oxidase protein | pSymB:complement(1108027..1110063) | 1 |
| surE | SMc02063 | SURVIVAL PROTEIN | 1654441..1655211 | |
| syrA | SMa0838 | SyrA protein involved in EPS production | pSymA:462211..462456 | 8 |
| syrB | SMa1698 | SyrB regulatory protein | pSymA:complement(957928..958383) | 5 |
| syrB2 | SMa1586 | SyrB2 transcriptional regulator | pSymA:complement(879859..880314) | |
| syrM | SMa0849 | SyrM transcriptional regulator | pSymA:466418..467398 | 7 |
| thiC | SMb20615 | putative thiamine biosynthesis protein | pSymB:1633944..1635779 | 1 |
| thiD | SMb20962 | probable phoshomethylpyrimidine kinase protein | pSymB:complement(1191117..1191917) | 1 |
| thiO | SMb20616 | putative thiamine biosynthesis oxidoreductase protein | pSymB:1635781..1636758 | 1 |
| thuA | SMb20329 | probable ThuA protein, function | pSymB:332477..333289 | 1 |
| thuB | SMb20330 | probable trehalosemaltose utilization protein, function | pSymB:333286..334383 | 1 |
| tig | SMc02050 | PROBABLE TRIGGER FACTOR PROTEIN | 1668617..1670092 | 1 |
| tkt2 | SMc03978 | PROBABLE TRANSKETOLASE PROTEIN | 2973395..2975377 | 1 |
| tme | SMc01126 | NADP-DEPENDENT MALIC ENZYME PROTEIN | complement(424367..426652) | 2 |
| tolC | SMc02082 | PUTATIVE OUTER MEMBRANE SECRETION PROTEIN | 1629672..1631042 | 2 |
| tpiA (tpiA1) | SMc01023 | PROBABLE TRIOSEPHOSPHATE ISOMERASE PROTEIN | 1548277..1549047 | 4 |
| tpiB (tpiA2) | SMc01614 | PUTATIVE TRIOSEPHOSPHATE ISOMERASE PROTEIN | complement(2404835..2405602) | 4 |
| trpE | SMc02725 | ANTHRANILATE SYNTHASE INCLUDES: GLUTAMINE AMIDOTRANSFERASE PROTEIN | complement(2573597..2575786) | 6 |
| typA | SMc03242 | PROBABLE GTP-BINDING PROTEIN (TYROSINE PHOSPHORYLATED PROTEIN A) | complement(3349924..3351750) | 1 |
Species: Glycine max |
| Gene Symbol |
Primary Locus |
Gene Function |
Gene Location |
#Mutants |
|---|
| GST9 | AF243364 | glutathione S-transferase GST 9 | | 1 |
| GmAKR1 | FJ430074 | putative alto/keto reductase | | 1 |
| GmN6L | AF434718 | nodulin 6l | | |
| NARK (CLV1B) | NARK | Nodule autoregulation receptor-like protein kinase precursor | Chromosome H; LG H; mapped between markers pUTG132a and UQC-IS1 | 6 |
| Rj2 | Rj2 | gene controlling nitrogen fixation and assimilation | | |
| Rj3 | Rj3 | gene controlling nitrogen fixation and assimilation | | 1 |
| Rj4 | Rj4 | gene controlling nitrogen fixation and assimilation | | |
| Rj5 | Rj5 | gene controlling nitrogen fixation and assimilation | | 1 |
| SAN1A | SAN1A | senescence-associated nodulin 1A | | |
| SAN1B | SAN1B | senescence-associated nodulin 1B | | |
| rj1 | rj1 | naturally occuring recessive non-nodulation gene | | 3 |
| rj6 | rj6 | gene controlling nodulation in soybean | | 2 |
| rj7 | rj7 | hypernodulation gene | | 2 |
| rj8 | rj8 | hypernodulation gene | | 1 |
Species: Bradyrhizobium japonicum |
| Gene Symbol |
Primary Locus |
Gene Function |
Gene Location |
#Mutants |
|---|
| ORF126 | blr4775 | two-component response regulator | | 2 |
| acdS | blr0241 | 1-aminocyclopropane-1-carboxylate deaminase | 235722..236735 | |
| aspA | blr1326 | aspartate ammonium lyase | 1439878..1441278 | 2 |
| basR (ttsI, id284) | bll1843 | two-component response regulator | complement(1996847..1997536) | 2 |
| bcpB | bll5069 | BcpB protein | complement(5623070..5623651) | 1 |
| chvA | bll1321 | beta-1,2-glucan export ATP-binding protein | complement(1434408..1436216) | 2 |
| cycH | blr3125 | cytochrome C-type biogenesis protein | 3450052..3451161 | 3 |
| cycJ | blr3126 | cytochrome C-type biogenesis protein | 3451196..3451705 | 2 |
| cycK | blr3127 | cytochrome C-type biogenesis protein | 3451702..3453684 | 2 |
| cycL | blr3128 | cytochrome C-type biogenesis protein | 3453689..3454171 | 2 |
| ecfG | blr7797 | RNA polymerase sigma factor | 8546075..8546623 | 1 |
| exoB | blr7578 | UDP-glucose 4'-epimerase | 8314046..8315038 | 4 |
| exoM | bll7574 | UDP-hexose transferase | complement(8308340..8309368) | |
| exoN | blr1499 | UTP--glucose-1-phosphate uridylyltransferase | 1633599..1634474 | |
| exoP | bll2362 | succinoglycan biosynthesis transport protein | complement(2565882..2568116) | 3 |
| exoT | blr7577 | UDP-hexose transferase | 8313220..8314026 | 1 |
| exoU | blr7573 | UDP-hexose transferase | 8307383..8308324 | |
| exoZ | blr2369 | probable exopolysaccharide production protein | 2574875..2575933 | |
| fdxN | bsr1739 | ferredoxin | 1904611..1904805 | 2 |
| fixA | blr2038 | electron transfer flavoprotein beta chain | 2198527..2199393 | |
| fixB | blr1773 | electron transfer flavoprotein alpha chain | 1932321..1933430 | |
| fixC | blr1774 | flavoprotein | 1933442..1934749 | |
| fixJ | bll2759 | two-component response regulator | complement(3037152..3037769) | 2 |
| fixK | bll6061 | transcriptional regulatory protein | complement(6676653..6677366) | 3 |
| fixK2 | bll2757 | transcriptional regulatory protein | complement(3035890..3036597) | 2 |
| fixL | bll2760 | two-component oxygen-sensor histidine kinase | complement(3037773..3039290) | 2 |
| fixN | blr2763 | cytochrome-c oxidase | 3041005..3042654 | 16 |
| fixO | blr2764 | cb-type cytochrome c oxidase subunit II | 3042667..3043401 | 2 |
| fixP | blr2766 | cb-type cytochrome c oxidase subunit III | 3043586..3044458 | 1 |
| fixR | blr2036 | oxidoreductase | 2195172..2196008 | |
| fixX | bsr1775 | probable ferredoxin | 1934788..1935084 | 2 |
| frxA | bsr1760 | ferredoxin-like protein | 1923369..1923593 | 2 |
| fur | bll0797 | ferric uptake regulator | complement(856269..856724) | 1 |
| glyA | bll5033 | glycine hydroxymethyltransferase | complement(5578750..5580048) | 2 |
| groEL3 | bll2059 | GroEL3 chaperonin | complement(2220960..2222600) | |
| hemB | blr5037 | delta_aminolevulinic acid dehydratase | 5581955..5583694 | 1 |
| hemH | bll7752 | ferrochelatase | complement(8502242..8503279) | 1 |
| hemN (hemN2) | bll7086 | anaerbic coproporphyrinogen III oxidase | complement(7803047..7804399) | 1 |
| hsfA | bll0891 | hypothetical protein | complement(968564..970306) | 1 |
| id287 | bll1844 | unknown protein | complement(1997576..1997956) | |
| id289 | bsl1845 | unknown protein | complement(1998173..1998349) | |
| modA | blr8160 | ABC transporter molybdenum-binding protein | 8962069..8962851 | 1 |
| modB | blr8161 | molybdenum ABC transporter permease protein | 8962865..8963560 | 1 |
| ndvB | blr4614 | beta-(1-3)-glucosyl transferase | 5110709..5113378 | 1 |
| ndvC | bll4612 | putative beta (1-6) glucans synthase | complement(5108006..5109670) | 1 |
| ndvD | blr4613 | hypothetical protein | 5109894..5110490 | 1 |
| nfeC | bll2067 | nodulate formation efficiency C protein | complement(2231080..2231907) | 1 |
| nifA | blr2037 | nif-specific regulatory protein | 2196192..2198009 | 4 |
| nifB | blr1759 | FeMo cofactor biosynthesis protein | 1921859..1923358 | |
| nifD | blr1743 | nitrogenase molybdenum-iron protein alpha chain | 1907825..1909327 | |
| nifE | blr1745 | nitrogenase molybdenum-cofactor synthesis protein | 1911042..1912685 | |
| nifH | blr1769 | dinitrogenase reductase protein | 1928567..1929451 | |
| nifK | blr1744 | nitrogenase molybdenum-iron protein beta chain | 1909393..1910949 | |
| nifN | blr1746 | nitrogenase molybdenum-cofactor synthesis protein | 1912695..1914104 | |
| nifS | blr1756 | nitrogenase metalloclusters biosynthesis protein | 1919709..1920890 | |
| nifX | blr1747 | iron-molibdenum cofactor processing protein | 1914101..1914496 | |
| nirK | blr7089 | respiratory nitrite reductase | 7805819..7806922 | 1 |
| nodA | blr2025 | acyl transferase | 2184130..2184762 | |
| nodB | blr2026 | de N-acatylase | 2184759..2185418 | |
| nodC | blr2027 | chitin synthase | 2185433..2186890 | 2 |
| nodD1 | bll2023 | transcriptional regulatory protein | complement(2182392..2183336) | 7 |
| nodD2 | bll2021 | transcriptional regulatory protein | complement(2180766..2181758) | 4 |
| nodI | blr2030 | transporter of Nod factors | 2189171..2190091 | 1 |
| nodJ | blr2031 | NodJ protein | 2190095..2190883 | 1 |
| nodM | blr1632 | putative glucosamine synthase | 1791631..1793457 | |
| nodN (bll3460) | bll3460 | nodulation protein N | complement(3831232..3831690) | |
| nodN (blr3959) | blr3959 | nodulation protein N | 4394299..4394778 | |
| nodQ | bll1475 | sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase | complement(1608127..1610043) | |
| nodS | blr2028 | N-methyl transferase | 2186919..2187446 | 1 |
| nodU | blr2029 | 6-O-carbamoyl transferase | 2187460..2189169 | 1 |
| nodV | bll1715 | two component regulator | complement(1879666..1882335) | 1 |
| nodW | bll1714 | two component regulator | complement(1878986..1879669) | 6 |
| nodY | blr2024 | NodY protein | 2183450..2184088 | |
| nodZ | blr2035 | NodZ protein | 2193331..2194443 | 1 |
| noeD | blr1633 | NoeD protein | 1793790..1794230 | 2 |
| nolA | bll2019 | transcriptional regulatory protein | complement(2179134..2179778) | 3 |
| nolB | blr1812 | nodulation protein | 1966268..1966780 | 1 |
| nolK | bll1630 | GDP-fucose synthetase | complement(1788234..1789241) | |
| nolM | bsr2032 | NolM protein | 2190916..2191089 | |
| nolN | blr2033 | NolN protein | 2191127..2191522 | 1 |
| nolO | blr2034 | NolO protein | 2191519..2193165 | 2 |
| nolU | blr1814 | nodulation protein | 1967664..1968302 | 1 |
| nolV | blr1815 | nodulation protein | 1968299..1968919 | 1 |
| nolY | bll2016 | NolY | complement(2175928..2176656) | 1 |
| nolZ | bsl2015 | NolZ | complement(2175594..2175821) | 1 |
| norC | blr3214 | nitric oxide reductase subunit C | 3551781..3552233 | 1 |
| nosR | blr0314 | nitrous oxide reductase expression regulator | 324547..326886 | |
| nosZ | blr0315 | nitrous oxide reductase | 326883..328835 | 1 |
| nwsA | blr4773 | two-component hybrid sensor and regulator | 5287017..5289494 | 5 |
| nwsB | blr4774 | two-component response regulator | 5289491..5290156 | 3 |
| orf74 | blr7496 | nitrogen fixation protein | 8232646..8233104 | 1 |
| phyR | bll7795 | two-component response regulator | complement(8544807..8545628) | 1 |
| pmtA | blr0681 | phospholipid N-methyltransferase | 728435..729034 | 2 |
| proC | blr7454 | delta 1-pyrroline-5-carboxylate reductase | 8191661..8192539 | 1 |
| regR | bll0904 | two-component response regulator | complement(984614..985198) | 4 |
| regS | bll0905 | two-component sensor histidine kinase | complement(985272..986594) | 4 |
| rhcC1 | bll1811 | RhcC1 protein | complement(1965405..1966118) | 1 |
| rhcC2 | bll1842 | RhcC2 protein | complement(1995366..1996658) | 1 |
| rhcJ | blr1813 | nodulation prrotein nolT | 1966789..1967652 | 1 |
| rhcN | blr1816 | RhcN protein | 1968916..1970271 | 2 |
| rhcQ | blr1818 | RhcQ protein | 1970780..1971901 | 1 |
| rhcR | blr1819 | RhcR protein | 1971894..1972559 | 1 |
| rhcV | bll1800 | RhcV protein | complement(1955237..1957336) | 1 |
| rpoN1 | blr1883 | RNA polymerase sigma-54 subunit | 2037374..2038828 | 2 |
| rpoN2 | blr0723 | RNA polymerase sigma-54 subunit | 771986..773599 | 2 |
| sipF | bll5062 | prokaryotic type I signal peptidase | complement(5616318..5617082) | 2 |
| sipS | bll1167 | signal peptidase | complement(1285543..1286322) | 1 |
| sucA | bll0452 | alpha-ketoglutarate dehydrogenase | complement(488300..491257) | 1 |
| tlpA | bll1380 | thioredoxin-like protein | complement(1496312..1496977) | 1 |
| trpC | blr4810 | indole-3-glycerol-phosphate synthase | 5330289..5331110 | |
| trpD (bll2049) | bll2049 | anthranilate phosphoribosyltransferase | complement(2209100..2210113) | |
| trpD (blr4809) | blr4809 | anthranilate phosphoribosyltransferase | 5329268..5330281 | |
| y4xK | bll1841 | hypothetical protein | complement(1994693..1995355) | 1 |
| y4yJ | blr1817 | hypothetical protein | 1970247..1970783 | 1 |
| y4yQ | bll1803 | putative type III secretion protein SctD | complement(1958347..1959240) | 1 |
